<?xml version="1.0" encoding="UTF-8"?>
<rss version="2.0"
	xmlns:content="http://purl.org/rss/1.0/modules/content/"
	xmlns:wfw="http://wellformedweb.org/CommentAPI/"
	xmlns:dc="http://purl.org/dc/elements/1.1/"
	xmlns:atom="http://www.w3.org/2005/Atom"
	>

<channel>
	<title>Dan Wilson's Blog</title>
	<atom:link href="http://dan-wilson.co.uk/blog/feed/" rel="self" type="application/rss+xml" />
	<link>http://dan-wilson.co.uk/blog</link>
	<description></description>
	<pubDate>Wed, 30 Apr 2008 21:01:57 +0000</pubDate>
	<generator>http://wordpress.org/?v=2.5.1</generator>
	<language>en</language>
			<item>
		<title>Chemical Markup Language</title>
		<link>http://dan-wilson.co.uk/blog/2008/04/chemical-markup-language/</link>
		<comments>http://dan-wilson.co.uk/blog/2008/04/chemical-markup-language/#comments</comments>
		<pubDate>Wed, 30 Apr 2008 20:56:40 +0000</pubDate>
		<dc:creator>dan</dc:creator>
		
		<category><![CDATA[Research]]></category>

		<category><![CDATA[CASTEP]]></category>

		<category><![CDATA[CML]]></category>

		<guid isPermaLink="false">http://dan-wilson.co.uk/blog/?p=8</guid>
		<description><![CDATA[Over the last couple of years, I&#8217;ve spent quite a bit of time working with Chemical Markup Language (CML) as part of my day job. As its name suggests, this is an XML language for chemistry, and it is gaining more and more traction in the field of computational chemistry.
Many of our codes now output [...]]]></description>
			<content:encoded><![CDATA[<p>Over the last couple of years, I&#8217;ve spent quite a bit of time working with Chemical Markup Language (CML) as part of my day job. As its name suggests, this is an XML language for chemistry, and it is gaining more and more traction in the field of computational chemistry.</p>
<p>Many of our codes now output CML directly, in addition to their normal output files, which greatly simplifies post-analysis. Rather than writing tools which read proprietary output files, and which have to be modified for use with each different code, we can write tools which work with the CML, and (theoretically, at least) they will work everywhere. For complex analysis tasks, <a href="http://www.lexical.org.uk/" onclick="javascript:pageTracker._trackPageview ('/outbound/www.lexical.org.uk');">Andrew Walkingshaw&#8217;s</a> <a href="http://www.lexical.org.uk/science/golem/" onclick="javascript:pageTracker._trackPageview ('/outbound/www.lexical.org.uk');">Golem</a> toolkit provides libraries for dictionary-driven processing of CML files. For visualisation, <a href="http://jmol.sourceforge.net/" onclick="javascript:pageTracker._trackPageview ('/outbound/jmol.sourceforge.net');">Jmol</a> can display chemical structures, and <a href="http://uszla.me.uk" onclick="javascript:pageTracker._trackPageview ('/outbound/uszla.me.uk');">Toby White&#8217;s</a> <a href="http://cmlcomp.org/ccViz/" onclick="javascript:pageTracker._trackPageview ('/outbound/cmlcomp.org');">ccViz</a> is very useful for turning CML into XHTML, for visualisation with a web browser.</p>
<p>Anyway, to get to the point of this post&#8230; There are two announcements I would like to make! First, my work with Andrew Walkingshaw on adding CML output to the <a href="http://www.castep.org" onclick="javascript:pageTracker._trackPageview ('/outbound/www.castep.org');">CASTEP</a> code, is at long last available to UK academics via the <a href="http://ccpforge.cse.rl.ac.uk/projects/castep/" onclick="javascript:pageTracker._trackPageview ('/outbound/ccpforge.cse.rl.ac.uk');">CCPForge</a> website. Hopefully it will also be available in the next commercial release from <a href="http://www.accelrys.com" onclick="javascript:pageTracker._trackPageview ('/outbound/www.accelrys.com');">Accelrys</a>. Not all calculated properties are currently marked-up. If you have any specific requests, please let me know.</p>
<p>Secondly, I&#8217;ve opened a public repository of CML-related post-processing utilities on <a href="http://github.com/djw/cmlcomp-utils/" onclick="javascript:pageTracker._trackPageview ('/outbound/github.com');">GitHub</a> (if you haven&#8217;t heard of it, think Sourceforge done right). It&#8217;s a little barren at the moment, but I have quite a few things I plan to upload in the near future. If you have anything to contribute, please let me know.</p>
<p>That&#8217;s it for now!</p>
]]></content:encoded>
			<wfw:commentRss>http://dan-wilson.co.uk/blog/2008/04/chemical-markup-language/feed/</wfw:commentRss>
		</item>
		<item>
		<title>iSync Plugin for the Sony Ericsson W380</title>
		<link>http://dan-wilson.co.uk/blog/2008/03/isync-plugin-for-the-sony-ericsson-w380/</link>
		<comments>http://dan-wilson.co.uk/blog/2008/03/isync-plugin-for-the-sony-ericsson-w380/#comments</comments>
		<pubDate>Sat, 22 Mar 2008 14:29:32 +0000</pubDate>
		<dc:creator>dan</dc:creator>
		
		<category><![CDATA[Gadgets]]></category>

		<category><![CDATA[iSync]]></category>

		<category><![CDATA[Mac]]></category>

		<category><![CDATA[Sony Ericsson]]></category>

		<category><![CDATA[W380]]></category>

		<guid isPermaLink="false">http://dan-wilson.co.uk/blog/2008/03/isync-plugin-for-the-sony-ericsson-w380/</guid>
		<description><![CDATA[I&#8217;m usually pretty good about researching my gadgets before I buy them, but this time I slipped-up and bought a Sony Ericsson W380, which, despite being a nice little phone, isn&#8217;t supported by iSync on my Mac.

However, it turn out that with the Leopard developer tools, Apple now ships &#8220;iSync Plug-in Maker&#8221;, so I set [...]]]></description>
			<content:encoded><![CDATA[<p>I&#8217;m usually pretty good about researching my gadgets before I buy them, but this time I slipped-up and bought a Sony Ericsson W380, which, despite being a nice little phone, isn&#8217;t supported by iSync on my Mac.</p>
<div style="text-align:center;"><img src="http://dan-wilson.co.uk/blog/wp-content/uploads/2008/03/w380i.jpg" alt="w380i.jpg" border="0" width="305" height="200" /></div>
<p>However, it turn out that with the Leopard developer tools, Apple now ships &#8220;iSync Plug-in Maker&#8221;, so I set about making my own. The process wasn&#8217;t difficult — I suggest grabbing the <a href="http://developer.apple.com/documentation/DeveloperTools/Conceptual/iSyncPluginMakerUserGuide/" onclick="javascript:pageTracker._trackPageview ('/outbound/developer.apple.com');">User Guide</a> if you want to try for yourself. </p>
<p>In the spirit of sharing, here are:</p>
<ul>
<li> The &#8216;ppdoc&#8217; project <a href="/downloads/w380.zip">file</a>
<li> An installer <a href="/downloads/w380.dmg">package</a>
</ul>
<p>These, of course, come with the caveat that they are completely unsupported, and for use at your own risk&#8230;</p>
<p>The only limitation that I&#8217;m aware of is that Tasks aren&#8217;t supported. If you make any improvements, please let me know in the comments!</p>
]]></content:encoded>
			<wfw:commentRss>http://dan-wilson.co.uk/blog/2008/03/isync-plugin-for-the-sony-ericsson-w380/feed/</wfw:commentRss>
		</item>
	</channel>
</rss>
